BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011E04SP1|AL426222
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1770 1550 0.0
>3x_Contig1770
Length = 29267
Score = 1550 bits (774), Expect = 0.0
Identities = 792/806 (98%)
Strand = Plus / Plus
Query: 1 atcagcatttttagctggcgaaacacatacagtagacttcggcgagcctgaagcactatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12778 atcagcatttttagctggcgaaacacatacagtagacttcggcgagcctgaagcactatt 12837
Query: 61 ggacataatttttgccaaattgcctgaatattttaactagagttcaatcaaaaactgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12838 ggacataatttttgccaaattgcctgaatattttaactagagttcaatcaaaaactgaaa 12897
Query: 121 gtaaatgggctctaccttaaaavaacaataacaacaacgcaaagatagtagaagcaccac 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 12898 gtaaatgggctctaccttaaaaaaacaataacaacaacgcaaagatagtagaagcaccac 12957
Query: 181 cactttccaggatacaatctatcgttatagtgtgatttaatatcagagattcgatctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12958 cactttccaggatacaatctatcgttatagtgtgatttaatatcagagattcgatctggg 13017
Query: 241 agtwtactcaccagattatcaagcaattagtctatcttttatcaacaattcaaagctaat 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13018 agtatactcaccagattatcaagcaattagtctatcttttatcaacaattcaaagctaat 13077
Query: 301 ccaaatcacgactgagttattaargttgacaaaatagaaacagttcttttatratgcvaa 360
||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||| ||
Sbjct: 13078 ccaaatcacgactgagtaattaaagttgacaaaatagaaacagttcttttataatgcaaa 13137
Query: 361 ttgatacaggagtbacggtaatttcgtcttcctatcaaatccgtgacagargataccagc 420
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 13138 ttgatacaggagtaacggtaatttcgtcttcctatcaaatccgtgacagaagataccagc 13197
Query: 421 cgtacccactaavagaacacatccaactctattcgatacgcacgcrctgcacagttcctg 480
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 13198 cgtacccactaaaagaacacatccaactctattcgatacgcacgcactgcacagttcctg 13257
Query: 481 ccatataarcggracgttttttcactttttgagatgagatgagtgtattcgaraattttt 540
|||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 13258 ccatataaacggaacgttttttcactttttgagatgagatgagtgtattcgaaaattttt 13317
Query: 541 gtgtctaagagatctgatgcctttgtacgatgccatgaacaagggaatcgagagcagaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13318 gtgtctaagagatctgatgcctttgtacgatgccatgaacaagggaatcgagagcagaat 13377
Query: 601 catcgtcgggtacatgttgcvagtggttattatcacttgcgatgtcgtttaaagccattg 660
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 13378 catcgtcgggtacatgttgcaagtggttattatcacttgcgatgtcgtttaaagccattg 13437
Query: 661 tattatcctgaccgatgtcttggaccactgctggttgattggtgactcttttcaaggaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13438 tattatcctgaccgatgtcttggaccactgctggttgattggtgactcttttcaaggaag 13497
Query: 721 aatttttcctttgtaactcatataaatgggacaactgcccttgaacatctgggataagag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13498 aatttttcctttgtaactcatataaatgggacaactgcccttgaacatctgggataagag 13557
Query: 781 attgtagatcaggaagcggtttgata 806
||||||||||||||||||||||||||
Sbjct: 13558 attgtagatcaggaagcggtttgata 13583
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5716
Number of Sequences: 1807
Number of extensions: 5716
Number of successful extensions: 359
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)